CDS
| Accession Number | TCMCG007C05398 |
| gbkey | CDS |
| Protein Id | XP_018509273.2 |
| Location | join(3361287..3361409,3361741..3361812,3361925..3362020,3362125..3362268,3362366..3362463,3362553..3362640,3362720..3363070,3363174..3363416,3363501..3363682,3363684..3364368) |
| Gene | LOC103854967 |
| GeneID | 103854967 |
| Organism | Brassica rapa |
Protein
| Length | 694aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_018653757.2 |
| Definition | LOW QUALITY PROTEIN: eukaryotic translation initiation factor [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Eukaryotic translation initiation factor isoform |
| KEGG_TC | - |
| KEGG_Module |
M00428
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko03012 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03260
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03013
[VIEW IN KEGG] ko05416 [VIEW IN KEGG] map03013 [VIEW IN KEGG] map05416 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGTTGAGCTTGAGGCCAGGAGGAGGTCGTGGAGGAAGCATCTTCGCCCCACGCTCTGCCTTGTCTTCCTCTTCCTCCTCTGATCTTACCAATGCCGAAGACGCTCCTTCTTTTGCCGTTAAGAGAGGAGACTCGAGATTTGAGGGTCATGAGATTGTGCGGTTCACTCGCGAACAGCTTCTTCAGCTTAAAGAGGGTAGCCAAGTCTCTGATGAAGTTCTGAAGCTCGGTAAGGATATTGCATCTGATCTTTTTGGCGAAGAGCAGAGCTGGGGCCGTTCGGAAAACAAGCCTGCAGCTCAAGTTCAAAACCGTTACTCGGAGACTGATAACCGTGATTGGCATACTCGTGCACCAATTCCTTCCCCGAGTAAAGACAGGTCAAGGGAGGACCAACGCGAATCTAGAGATGCGTATTCTGGATCAATCCAAGGGTCTGGCCCTCCTCCTGCCCTTGTGAAAGCAGAGGTCCCATGGTCAGCTAAAAGAGGAACTCTTTCAGAAAAGGATCAAGTTCTCAAGACCGTGAAAGGTATTCTGAACAAGATGACTCCTGAGAAGTATGATCTTCTTAAGGGTCAACTAATTGACTCTGGCATCACATCTGCGGATATTCTAAAGGGAGTGATCCAGCTGATTTTTGAGAAGGCCGTACTAGAGCCCACATTTTGCCAGATGTATGCTCTTTTGTGTTTTGATATCAACGGAAAGCTGCCTTCGTTCCCATCAGAGGAAGCCGGAGGAAAAGAAATAACATTCAAAAGAGTGCTTTTGAATAATTGCCAAGAACAATTTGAAGGCGCTGACAAGTTGAAGGAAGAAGTCAGACTGATGACTGATCCATCGCAAGAAATGGAGCGCAAGGACAAGGAAAGGATGGCCAAGCTCAGGACATTAGGAAACATCCGTTTAATTGGTGAACTTCTGAAGCAGAAGATGGTGCCTGAGAAGATCGTTCATCACATCGTCCAGGAGCTTTTAGGATCCGACGATAAAGATTGCCCAGCAGAGGAAGATGTTGAGGCTCTTTGTCAAGTTTTCATCACCATTGGAAAACAACTCGATGAGAGCCTAAGATCACGAAGCATAAACGACATGTACTTCACCCGTTTGAAGGAACTAGCAGTGCACCCGATGTTAGAGCCACGCTTGAGATTTATGGTCCGTAATGTTGTTGATCTGCGAGCTAACAAGTGGGTACCAAGGCGTGAGGAGATGAAAGCCAAGAAAATCACTGAGATTCATTCAGAGGCAGAAAAGACTCTTGGGTTGCGCCCTGGTGCAATGTCGAATATGAGGAATAACAACAGCCGCGCCGGTGCGGATGCTGATATTCTTGGCTCTGGAAACTTCCTTGGACGCTCTGGCATTGGAGGAATGATGCCTGGTATGCCAGGGAACAAGTCGCTGTCGGTTAATTCAAGGCTCCTACCTCAGGGAAGCGGTGGTATCTTGAATGGTAAACCAAGTGCCCTATTGCAAGGCAACAGTGCTGAACCGGCTAAAGCTGTTGTTGCCCCGGCCAAACCAGCCGTGGAGAAGCCACAGCCACAGGTGGCGGCTCCTCCTATGGCTGCTACTAGCTTGAACTCAGAAGTGCTCAGCAGGAAGACCAAGTCGCTTTTGGAAGAGTATTTCAATGTCCGTCTGTTGGATGAGGCATTGCAATGCGTAGAGGAACTGAAATCCCCATCTTACCATCCCGAGCTCGTCAAGGAAGCTATCTCCCTCGGATTGGAGAAAAACCCACCGTGCGTTACACCAGTTGCAAATCTCTTGGCACATTTGGTCTCTAAGAACGTTCTAACTCCTAAAGACATAGGGAGTGGTTGTCTGCTTTACGGGTCTATGCTTGATGACATTGGAATCGATCTGCCAAAGGCGCCAAACAACTTTGGGGAGATCCTTGGGAGTTTGGTTATGGCCAGTGCGTCTGGTTTCGAGGTGGTCAAAGAGATTCTAATGAAAATGGAGGATGAGTGGTTCAAGAAAGCAGTCTTGGATGCTGTGATCAAGAGTGTAAGCGACTCTCTGTTGGTTACGCATGCAGCTGATGTCGAGGCGTGCCGTAGTTTGGTGTAG |
| Protein: MLSLRPGGGRGGSIFAPRSALSSSSSSDLTNAEDAPSFAVKRGDSRFEGHEIVRFTREQLLQLKEGSQVSDEVLKLGKDIASDLFGEEQSWGRSENKPAAQVQNRYSETDNRDWHTRAPIPSPSKDRSREDQRESRDAYSGSIQGSGPPPALVKAEVPWSAKRGTLSEKDQVLKTVKGILNKMTPEKYDLLKGQLIDSGITSADILKGVIQLIFEKAVLEPTFCQMYALLCFDINGKLPSFPSEEAGGKEITFKRVLLNNCQEQFEGADKLKEEVRLMTDPSQEMERKDKERMAKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSDDKDCPAEEDVEALCQVFITIGKQLDESLRSRSINDMYFTRLKELAVHPMLEPRLRFMVRNVVDLRANKWVPRREEMKAKKITEIHSEAEKTLGLRPGAMSNMRNNNSRAGADADILGSGNFLGRSGIGGMMPGMPGXNKSLSVNSRLLPQGSGGILNGKPSALLQGNSAEPAKAVVAPAKPAVEKPQPQVAAPPMAATSLNSEVLSRKTKSLLEEYFNVRLLDEALQCVEELKSPSYHPELVKEAISLGLEKNPPCVTPVANLLAHLVSKNVLTPKDIGSGCLLYGSMLDDIGIDLPKAPNNFGEILGSLVMASASGFEVVKEILMKMEDEWFKKAVLDAVIKSVSDSLLVTHAADVEACRSLV |